BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039H11LP1|AL430776
(958 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig784 1150 0.0
>3x_Contig784
Length = 1678
Score = 1150 bits (580), Expect = 0.0
Identities = 613/622 (98%), Gaps = 4/622 (0%)
Strand = Plus / Minus
Query: 341 cgtcgcagctaccaatactatttcgttggatgattttt-caaggtccacagctaagggta 399
|||||| ||| ||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1637 cgtcgctgctcccattactatttcgttggatgattttttcaaggtccacagctaagggta 1578
Query: 400 gtggtaacagatttggcggtgggaaattggatccagctttgagaaaagaac---gtgaag 456
|||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 1577 gtggtaacagatttggcggtgggaaattggatccagctttgagaaaaggatactgtgaag 1518
Query: 457 agtacccaattccagacttcccacctttcaaggccatcatcaacaacattccatgggata 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1517 agtacccaattccagacttcccacctttcaaggccatcatcaacaacattccatgggata 1458
Query: 517 ttacagaaattggtatccaacagtgggttgaagacggtttgaataaggaaggtgctgtct 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1457 ttacagaaattggtatccaacagtgggttgaagacggtttgaataaggaaggtgctgtct 1398
Query: 577 tggaagttatggctccaagacacccggacaacgatagacttaagggtatggcctttgtta 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1397 tggaagttatggctccaagacacccggacaacgatagacttaagggtatggcctttgtta 1338
Query: 637 cattcaacgaacgttctgatttggagaaggctttgacctttagttcgtccaagttaaatg 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1337 cattcaacgaacgttctgatttggagaaggctttgacctttagttcgtccaagttaaatg 1278
Query: 697 atcgtaccgtttacgtttctgttgctgcgccaagaagcaactacggtggtcgttccaact 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1277 atcgtaccgtttacgtttctgttgctgcgccaagaagcaactacggtggtcgttccaact 1218
Query: 757 tcgatgatatggactggtccggtgccagaggttccaacttcagggagggtggaagagagg 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1217 tcgatgatatggactggtccggtgccagaggttccaacttcagggagggtggaagagagg 1158
Query: 817 ccggcccagaaccagattggtccgctgctaggggttctaacttcagagaatctagaacta 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1157 ccggcccagaaccagattggtccgctgctaggggttctaacttcagagaatctagaacta 1098
Query: 877 gggaagctggtctagaaccagattggtcttctgctagaggctccaatttcagagaaccaa 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1097 gggaagctggtctagaaccagattggtcttctgctagaggctccaatttcagagaaccaa 1038
Query: 937 gagaaccaagagagcctgtccc 958
||||||||||||||||||||||
Sbjct: 1037 gagaaccaagagagcctgtccc 1016
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7049
Number of Sequences: 1807
Number of extensions: 7049
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 958
length of database: 10,358,551
effective HSP length: 16
effective length of query: 942
effective length of database: 10,329,639
effective search space: 9730519938
effective search space used: 9730519938
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)